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One or more keywords matched the following properties of Jin, Guangxu
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keywords Bioinformatics, Single-cell RNA sequencing, Cancer Immunotherapy, Spatial Transcriptomics
overview I am an Assistant Professor of Bioinformatics in the Department of Cancer Biology, Wake Forest School of Medicine, and currently a Full Member of Bioinformatics Shared Resources at the Wake Forest Baptist Comprehensive Cancer Center. I have been studying clinical genetics in cancer treatments and single-cell genomics in cancer immunotherapy. My team has pioneered work in single-cell modeling of response to checkpoint immunotherapy and developed an innovative projection-free single-cell modeling algorithm for this field. My current research focuses are the roles of CAR T cells in inducing neurotoxicity associated with CAR-T cell therapies, genetic biomarkers for surgical outcomes in appendiceal cancer, and genetics-level understanding of the SARS-CoV-2 variants. Our lab published over 40 papers in this field (i10-index=29, h-index=20). Our papers published in high-impact journals, including Cancer Cell, Lancet Oncology, JAMA Oncology, Nature Communications, Nature Biomedical Engineering, Briefings of Bioinformatics, etc. Our collaborating projects have been well funded by NIH/NCI, DoD, and other federal funding agencies. Our lab has a long-term interest in developing novel computational methods for sequencing analysis and their application to translational and clinical research.
One or more keywords matched the following items that are connected to Jin, Guangxu
Item TypeName
Concept Cell Movement
Concept Cell Transformation, Neoplastic
Concept Cell Cycle Proteins
Concept Cell Respiration
Concept Pancreatic Neoplasms
Concept Bone Neoplasms
Concept Cell Differentiation
Concept Computational Biology
Concept Peritoneal Neoplasms
Concept Liver Neoplasms
Concept Cell Proliferation
Concept Immunotherapy
Concept Brain Neoplasms
Concept Lung Neoplasms
Concept Neoplastic Stem Cells
Concept Appendiceal Neoplasms
Concept Chemotherapy, Cancer, Regional Perfusion
Concept Cell Line
Concept Breast Neoplasms
Concept Neoplasms
Concept Myeloid Cells
Concept Cell Line, Tumor
Academic Article Modeling the relationship of epigenetic modifications to transcription factor binding.
Academic Article Computational systems biology in cancer brain metastasis.
Academic Article Safety and tolerability of the first-in-class agent CPI-613 in combination with modified FOLFIRINOX in patients with metastatic pancreatic cancer: a single-centre, open-label, dose-escalation, phase 1 trial.
Academic Article Interaction between STAT3 and GLI1/tGLI1 oncogenic transcription factors promotes the aggressiveness of triple-negative breast cancers and HER2-enriched breast cancer.
Academic Article A Phase I Study of CPI-613 in Combination with High-Dose Cytarabine and Mitoxantrone for Relapsed or Refractory Acute Myeloid Leukemia.
Academic Article Loss of XIST in Breast Cancer Activates MSN-c-Met and Reprograms Microglia via Exosomal miRNA to Promote Brain Metastasis.
Academic Article Tumor mutational burden is a determinant of immune-mediated survival in breast cancer.
Academic Article A novel method of transcriptional response analysis to facilitate drug repositioning for cancer therapy.
Academic Article Tumour-specific amplitude-modulated radiofrequency electromagnetic fields induce differentiation of hepatocellular carcinoma via targeting Cav3.2?T-type voltage-gated calcium channels and Ca2+ influx.
Academic Article Novel modeling of cancer cell signaling pathways enables systematic drug repositioning for distinct breast cancer metastases.
Academic Article Chloroquine eliminates cancer stem cells through deregulation of Jak2 and DNMT1.
Academic Article IL-4 together with IL-1ß induces antitumor Th9 cell differentiation in the absence of TGF-ß signaling.
Academic Article Transcriptional signaling pathways inversely regulated in Alzheimer's disease and glioblastoma multiform.
Academic Article Dissecting intratumoral myeloid cell plasticity by single cell RNA-seq.
Academic Article DrugMap Central: an on-line query and visualization tool to facilitate drug repositioning studies.
Academic Article Bayesian network model for identification of pathways by integrating protein interaction with genetic interaction data.
Academic Article PRESM: personalized reference editor for somatic mutation discovery in cancer genomics.
Academic Article Chapter 17: bioimage informatics for systems pharmacology.
Academic Article SPARC Inhibits Metabolic Plasticity in Ovarian Cancer.
Academic Article The effect of mTOR inhibition alone or combined with MEK inhibitors on brain metastasis: an in vivo analysis in triple-negative breast cancer models.
Academic Article Prognostic Molecular Classification of Appendiceal Mucinous Neoplasms Treated with Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy.
Academic Article Transcriptomic Features of T Cell-Barren Tumors Are Conserved Across Diverse Tumor Types.
Academic Article TrkA Interacts with and Phosphorylates STAT3 to Enhance Gene Transcription and Promote Breast Cancer Stem Cells in Triple-Negative and HER2-Enriched Breast Cancers.
Academic Article Inactivating Mutations of the IK Gene Weaken Ku80/Ku70-Mediated DNA Repair and Sensitize Endometrial Cancer to Chemotherapy.
Academic Article Clinical Implications of Genetic Signatures in Appendiceal Cancer Patients with Incomplete Cytoreduction/HIPEC.
Academic Article Elimination of acquired resistance to PD-1 blockade via the concurrent depletion of tumour cells and immunosuppressive cells.
Academic Article Adoptive cell therapy with tumor-specific Th9 cells induces viral mimicry to eliminate antigen-loss-variant tumor cells.
Academic Article hDirect-MAP: projection-free single-cell modeling of response to checkpoint immunotherapy.
Academic Article Bulk and Single-Cell Profiling of Breast Tumors Identifies TREM-1 as a Dominant Immune Suppressive Marker Associated With Poor Outcomes.
Academic Article VOC-alarm: Mutation-based prediction of SARS-CoV-2 variants of concern.
Academic Article Breast cancer extracellular vesicles-derived miR-1290 activates astrocytes in the brain metastatic microenvironment via the FOXA2?CNTF axis to promote progression of brain metastases.
Academic Article NEDD4 degrades TUSC2 to promote glioblastoma progression.
Academic Article Induction of tumor cell autosis by myxoma virus-infected CAR-T and TCR-T cells to overcome primary and acquired resistance.
Search Criteria
  • Bioinformatics
  • Single
  • cell
  • RNA sequencing
  • Cancer
  • Immunotherapy
  • Spatial
  • Transcriptomics